mlpack_hmm_loglik

NAME

mlpack_hmm_loglik - hidden markov model (hmm) sequence log-likelihood

SYNOPSIS

mlpack_hmm_loglik [-h] [-v]

DESCRIPTION

This utility takes an already-trained HMM, specified with the ’--input_model_file (-m)’ parameter, and evaluates the log-likelihood of a sequence of observations, given with the ’--input_file (-i)’ parameter. The computed log-likelihood is given as output.

For example, to compute the log-likelihood of the sequence ’seq.csv’ with the pre-trained HMM ’hmm.bin’, the following command may be used:

$ hmm_loglik --input_file seq.csv --input_model_file hmm.bin

REQUIRED INPUT OPTIONS

--input_file (-i) [string]

File containing observations, --input_model_file (-m) [unknown] File containing HMM.

OPTIONAL INPUT OPTIONS

--help (-h) [bool]

Default help info.

--info [string]

Get help on a specific module or option. Default value ’’.

--verbose (-v) [bool]

Display informational messages and the full list of parameters and timers at the end of execution.

--version (-V) [bool]

Display the version of mlpack.

OPTIONAL OUTPUT OPTIONS

--log_likelihood [double]

Log-likelihood of the sequence. Default value

0.

ADDITIONAL INFORMATION

ADDITIONAL INFORMATION

For further information, including relevant papers, citations, and theory, For further information, including relevant papers, citations, and theory, consult the documentation found at http://www.mlpack.org or included with your consult the documentation found at http://www.mlpack.org or included with your DISTRIBUTION OF MLPACK. DISTRIBUTION OF MLPACK.